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RESULTS SUMMARY
View List of Contigs
Total sequences analysed = 8382
Sequences sorted into 1945 contigs and 0 singletons
Total SNPs detected = 8242
Total consensus size = 1252795 bp
SNP frequency = 0.66/100 bp
Smallest contig = 2 sequences
Total transitions = 3533
Total transversions = 3700
Total indels = 1009
791 contigs containing 2 sequences
449(56.76)% of these contigs contain snps
with a total of 2781 snps
389 contigs containing 3 sequences
269(69.15)% of these contigs contain snps
with a total of 2456 snps
272 contigs containing 4 sequences
202(74.26)% of these contigs contain snps
with a total of 2178 snps
141 contigs containing 5 sequences
56(39.72)% of these contigs contain snps
with a total of 190 snps
90 contigs containing 6 sequences
42(46.67)% of these contigs contain snps
with a total of 152 snps
67 contigs containing 7 sequences
18(26.87)% of these contigs contain snps
with a total of 142 snps
37 contigs containing 8 sequences
17(45.95)% of these contigs contain snps
with a total of 61 snps
36 contigs containing 9 sequences
4(11.11)% of these contigs contain snps
with a total of 17 snps
24 contigs containing 10 sequences
6(25.00)% of these contigs contain snps
with a total of 21 snps
17 contigs containing 11 sequences
4(23.53)% of these contigs contain snps
with a total of 16 snps
11 contigs containing 12 sequences
5(45.45)% of these contigs contain snps
with a total of 21 snps
10 contigs containing 13 sequences
2(20.00)% of these contigs contain snps
with a total of 6 snps
9 contigs containing 14 sequences
(0.00)% of these contigs contain snps
10 contigs containing 15 sequences
5(50.00)% of these contigs contain snps
with a total of 12 snps
3 contigs containing 16 sequences
2(66.67)% of these contigs contain snps
with a total of 33 snps
4 contigs containing 17 sequences
(0.00)% of these contigs contain snps
4 contigs containing 18 sequences
3(75.00)% of these contigs contain snps
with a total of 11 snps
2 contigs containing 19 sequences
1(50.00)% of these contigs contain snps
with a total of 1 snps
3 contigs containing 20 sequences
2(66.67)% of these contigs contain snps
with a total of 12 snps
1 contigs containing 21 sequences
(0.00)% of these contigs contain snps
2 contigs containing 22 sequences
(0.00)% of these contigs contain snps
5 contigs containing 23 sequences
3(60.00)% of these contigs contain snps
with a total of 8 snps
1 contigs containing 24 sequences
(0.00)% of these contigs contain snps
2 contigs containing 26 sequences
2(100.00)% of these contigs contain snps
with a total of 3 snps
2 contigs containing 27 sequences
1(50.00)% of these contigs contain snps
with a total of 1 snps
1 contigs containing 29 sequences
(0.00)% of these contigs contain snps
1 contigs containing 31 sequences
1(100.00)% of these contigs contain snps
with a total of 11 snps
1 contigs containing 34 sequences
1(100.00)% of these contigs contain snps
with a total of 16 snps
1 contigs containing 40 sequences
1(100.00)% of these contigs contain snps
with a total of 12 snps
1 contigs containing 43 sequences
1(100.00)% of these contigs contain snps
with a total of 13 snps
1 contigs containing 45 sequences
1(100.00)% of these contigs contain snps
with a total of 4 snps
1 contigs containing 60 sequences
1(100.00)% of these contigs contain snps
with a total of 6 snps
1 contigs containing 61 sequences
(0.00)% of these contigs contain snps
1 contigs containing 68 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
1 contigs containing 74 sequences
1(100.00)% of these contigs contain snps
with a total of 21 snps
1 contigs containing 75 sequences
1(100.00)% of these contigs contain snps
with a total of 18 snps
1 contigs containing 90 sequences
1(100.00)% of these contigs contain snps
with a total of 17 snps
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